Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB3GAP1Q15042 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 KRT8P39-201ENST00000396270 1433 ntBASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 MIR4453-201ENST00000584019 89 ntBASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 AL390754.1-201ENST00000619088 582 ntBASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 AJ011932.1-201ENST00000621707 465 ntBASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3GAP1Q15042 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB3GAP1Q15042 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3GAP1Q15042 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.52■□□□□ 0.71
RAB3GAP1Q15042 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3GAP1Q15042 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.71
RAB3GAP1Q15042 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.52■□□□□ 0.71
RAB3GAP1Q15042 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3GAP1Q15042 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 AC142381.1-201ENST00000426099 345 ntBASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 POU5F1P6-201ENST00000466990 990 ntBASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 AC105233.2-201ENST00000523697 349 ntBASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 AC069120.2-201ENST00000524091 540 ntBASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 AF228730.5-201ENST00000530288 346 ntBASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3GAP1Q15042 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms