Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEP78395 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEP78395 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEP78395 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 AP003680.1-201ENST00000598970 3660 ntBASIC16.26■□□□□ 0.19
PRAMEP78395 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEP78395 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEP78395 ACTG1P14-201ENST00000446382 1122 ntBASIC16.26■□□□□ 0.19
PRAMEP78395 AC098859.1-201ENST00000502915 1238 ntBASIC16.26■□□□□ 0.19
PRAMEP78395 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEP78395 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEP78395 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 MIR4321-201ENST00000592276 80 ntBASIC16.26■□□□□ 0.19
PRAMEP78395 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.26■□□□□ 0.19
PRAMEP78395 AC026120.1-201ENST00000611536 926 ntBASIC16.26■□□□□ 0.19
PRAMEP78395 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 AC008267.7-201ENST00000624570 1194 ntBASIC16.26■□□□□ 0.19
PRAMEP78395 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PRAMEP78395 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 AC112504.1-201ENST00000623415 1841 ntBASIC16.26■□□□□ 0.19
PRAMEP78395 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEP78395 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEP78395 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEP78395 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEP78395 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEP78395 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRAMEP78395 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRAMEP78395 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PRAMEP78395 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PRAMEP78395 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEP78395 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEP78395 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEP78395 SPTSSB-204ENST00000617024 1292 ntBASIC16.25■□□□□ 0.19
PRAMEP78395 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PRAMEP78395 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEP78395 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEP78395 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEP78395 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEP78395 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEP78395 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEP78395 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms