Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.96□□□□□ -0.17
UBA52P62987 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.96□□□□□ -0.17
UBA52P62987 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.96□□□□□ -0.17
UBA52P62987 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.96□□□□□ -0.17
UBA52P62987 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.96□□□□□ -0.17
UBA52P62987 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.96□□□□□ -0.17
UBA52P62987 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
UBA52P62987 MRPL20P1-201ENST00000400819 433 ntBASIC13.96□□□□□ -0.17
UBA52P62987 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.96□□□□□ -0.17
UBA52P62987 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.96□□□□□ -0.17
UBA52P62987 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.96□□□□□ -0.17
UBA52P62987 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.96□□□□□ -0.17
UBA52P62987 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.96□□□□□ -0.17
UBA52P62987 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.96□□□□□ -0.17
UBA52P62987 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.96□□□□□ -0.17
UBA52P62987 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 AL805961.1-202ENST00000641562 540 ntBASIC13.96□□□□□ -0.17
UBA52P62987 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
UBA52P62987 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.96□□□□□ -0.18
UBA52P62987 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.96□□□□□ -0.18
UBA52P62987 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.96□□□□□ -0.18
UBA52P62987 SNX18-202ENST00000343017 3140 ntBASIC13.96□□□□□ -0.18
UBA52P62987 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBA52P62987 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBA52P62987 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
UBA52P62987 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.96□□□□□ -0.18
UBA52P62987 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
UBA52P62987 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
UBA52P62987 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
UBA52P62987 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.96□□□□□ -0.18
UBA52P62987 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBA52P62987 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBA52P62987 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.95□□□□□ -0.18
UBA52P62987 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.95□□□□□ -0.18
UBA52P62987 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
UBA52P62987 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 CICP4-201ENST00000447359 2812 ntBASIC13.95□□□□□ -0.18
UBA52P62987 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.95□□□□□ -0.18
UBA52P62987 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
UBA52P62987 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.95□□□□□ -0.18
UBA52P62987 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
UBA52P62987 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.95□□□□□ -0.18
UBA52P62987 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 AC097376.2-205ENST00000610159 5334 ntBASIC13.95□□□□□ -0.18
UBA52P62987 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.95□□□□□ -0.18
UBA52P62987 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.95□□□□□ -0.18
UBA52P62987 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 AC026748.1-201ENST00000624349 3251 ntBASIC13.95□□□□□ -0.18
UBA52P62987 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBA52P62987 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.94□□□□□ -0.18
UBA52P62987 AC007292.2-201ENST00000593524 1812 ntBASIC13.94□□□□□ -0.18
UBA52P62987 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBA52P62987 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms