Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 KRT8P23-201ENST00000560090 1207 ntBASIC14.4□□□□□ -0.1
CLRN1P58418 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.4□□□□□ -0.1
CLRN1P58418 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.4□□□□□ -0.1
CLRN1P58418 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CLRN1P58418 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.4□□□□□ -0.1
CLRN1P58418 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.4□□□□□ -0.1
CLRN1P58418 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 ELL2P1-201ENST00000413990 1906 ntBASIC14.4□□□□□ -0.1
CLRN1P58418 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CLRN1P58418 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.4□□□□□ -0.1
CLRN1P58418 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 AC112504.1-201ENST00000623415 1841 ntBASIC14.4□□□□□ -0.1
CLRN1P58418 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.4□□□□□ -0.1
CLRN1P58418 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.4□□□□□ -0.1
CLRN1P58418 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLRN1P58418 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CLRN1P58418 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.4□□□□□ -0.11
CLRN1P58418 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.39□□□□□ -0.11
CLRN1P58418 PRAL-201ENST00000624952 3286 ntBASIC14.39□□□□□ -0.11
CLRN1P58418 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 AP003680.1-201ENST00000598970 3660 ntBASIC14.39□□□□□ -0.11
CLRN1P58418 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.39□□□□□ -0.11
CLRN1P58418 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 AL592309.1-201ENST00000443127 649 ntBASIC14.39□□□□□ -0.11
CLRN1P58418 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.39□□□□□ -0.11
CLRN1P58418 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.39□□□□□ -0.11
CLRN1P58418 AP000842.3-202ENST00000569238 1080 ntBASIC14.39□□□□□ -0.11
CLRN1P58418 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.39□□□□□ -0.11
CLRN1P58418 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLRN1P58418 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.39□□□□□ -0.11
CLRN1P58418 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.39□□□□□ -0.11
CLRN1P58418 AL161772.1-201ENST00000610494 4412 ntBASIC14.39□□□□□ -0.11
CLRN1P58418 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CLRN1P58418 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLRN1P58418 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLRN1P58418 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLRN1P58418 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.38□□□□□ -0.11
CLRN1P58418 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CLRN1P58418 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CLRN1P58418 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.38□□□□□ -0.11
CLRN1P58418 AC132872.4-202ENST00000622924 2756 ntBASIC14.38□□□□□ -0.11
CLRN1P58418 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.38□□□□□ -0.11
CLRN1P58418 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLRN1P58418 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms