Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.03■□□□□ -0
CDH12P55289 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.03■□□□□ -0
CDH12P55289 MIR3909-201ENST00000579518 119 ntBASIC15.03■□□□□ -0
CDH12P55289 SLC25A6P4-201ENST00000586535 553 ntBASIC15.03■□□□□ -0
CDH12P55289 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH12P55289 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CDH12P55289 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH12P55289 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.03■□□□□ -0
CDH12P55289 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH12P55289 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.03■□□□□ -0
CDH12P55289 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH12P55289 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.03■□□□□ -0
CDH12P55289 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDH12P55289 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.02■□□□□ -0
CDH12P55289 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDH12P55289 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.02■□□□□ -0
CDH12P55289 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
CDH12P55289 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.02■□□□□ -0
CDH12P55289 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.02■□□□□ -0
CDH12P55289 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
CDH12P55289 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.02■□□□□ -0
CDH12P55289 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.02■□□□□ -0
CDH12P55289 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDH12P55289 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
CDH12P55289 AL662844.1-201ENST00000546340 181 ntBASIC15.02■□□□□ -0
CDH12P55289 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.02■□□□□ -0
CDH12P55289 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDH12P55289 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.02■□□□□ -0
CDH12P55289 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.02■□□□□ -0
CDH12P55289 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDH12P55289 AC010507.1-201ENST00000633895 436 ntBASIC15.02■□□□□ -0
CDH12P55289 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH12P55289 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDH12P55289 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 AL136379.1-201ENST00000623471 2642 ntBASIC15.02□□□□□ -0.01
CDH12P55289 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH12P55289 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
CDH12P55289 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH12P55289 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH12P55289 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH12P55289 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH12P55289 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH12P55289 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH12P55289 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CDH12P55289 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH12P55289 HLA-A-201ENST00000376802 1334 ntBASIC15.01□□□□□ -0.01
CDH12P55289 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH12P55289 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 HAUS4P1-201ENST00000406739 1145 ntBASIC15.01□□□□□ -0.01
CDH12P55289 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms