Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC16.05■□□□□ 0.16
NUBP1P53384 HIST2H2BC-201ENST00000498492 580 ntBASIC16.05■□□□□ 0.16
NUBP1P53384 AC106760.1-201ENST00000508690 800 ntBASIC16.05■□□□□ 0.16
NUBP1P53384 SCARNA1-201ENST00000517138 166 ntBASIC16.05■□□□□ 0.16
NUBP1P53384 AC005951.1-201ENST00000576706 485 ntBASIC16.05■□□□□ 0.16
NUBP1P53384 AC026740.1-201ENST00000607068 791 ntBASIC16.05■□□□□ 0.16
NUBP1P53384 AC122108.2-201ENST00000611946 526 ntBASIC16.05■□□□□ 0.16
NUBP1P53384 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC16.05■□□□□ 0.16
NUBP1P53384 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NUBP1P53384 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.05■□□□□ 0.16
NUBP1P53384 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.05■□□□□ 0.16
NUBP1P53384 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NUBP1P53384 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NUBP1P53384 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.05■□□□□ 0.16
NUBP1P53384 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.05■□□□□ 0.16
NUBP1P53384 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 AC015818.8-201ENST00000587907 1519 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 AC120498.9-201ENST00000339021 3867 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NUBP1P53384 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.04■□□□□ 0.16
NUBP1P53384 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NUBP1P53384 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 AHCYP2-201ENST00000430630 1300 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NUBP1P53384 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 CCL7-202ENST00000394627 696 ntTSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 TOMM22P5-201ENST00000416399 439 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 RN7SL720P-201ENST00000488178 304 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 AC022137.2-201ENST00000503482 481 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NUBP1P53384 NFRKB-205ENST00000526940 539 ntTSL 2 BASIC16.04■□□□□ 0.16
NUBP1P53384 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 AC025279.2-201ENST00000569730 653 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.04■□□□□ 0.16
NUBP1P53384 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 EEF1DP1-201ENST00000585891 896 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NUBP1P53384 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 LINC01115-203ENST00000606068 577 ntBASIC16.04■□□□□ 0.16
NUBP1P53384 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.04■□□□□ 0.16
NUBP1P53384 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.04■□□□□ 0.16
NUBP1P53384 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.04■□□□□ 0.16
NUBP1P53384 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NUBP1P53384 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.04■□□□□ 0.16
NUBP1P53384 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NUBP1P53384 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUBP1P53384 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUBP1P53384 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.03■□□□□ 0.16
NUBP1P53384 AC138028.4-201ENST00000564984 1845 ntBASIC16.03■□□□□ 0.16
NUBP1P53384 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUBP1P53384 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NUBP1P53384 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.03■□□□□ 0.16
NUBP1P53384 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NUBP1P53384 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NUBP1P53384 CCT6P3-203ENST00000452026 1383 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms