Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.56■□□□□ 0.4
CLCN3P51790 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.56■□□□□ 0.4
CLCN3P51790 HNRNPUP1-201ENST00000554987 333 ntBASIC17.56■□□□□ 0.4
CLCN3P51790 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCN3P51790 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCN3P51790 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCN3P51790 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCN3P51790 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 AL596087.1-201ENST00000400979 1969 ntBASIC17.55■□□□□ 0.4
CLCN3P51790 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 GK-202ENST00000378941 458 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCN3P51790 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CLCN3P51790 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCN3P51790 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.55■□□□□ 0.4
CLCN3P51790 RARRES2P5-201ENST00000564013 466 ntBASIC17.55■□□□□ 0.4
CLCN3P51790 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCN3P51790 AC132938.2-201ENST00000579188 680 ntBASIC17.55■□□□□ 0.4
CLCN3P51790 AL450472.2-201ENST00000603663 1156 ntBASIC17.55■□□□□ 0.4
CLCN3P51790 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 AL158212.4-201ENST00000624062 1286 ntBASIC17.55■□□□□ 0.4
CLCN3P51790 AL591163.1-201ENST00000641757 987 ntBASIC17.55■□□□□ 0.4
CLCN3P51790 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLCN3P51790 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCN3P51790 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCN3P51790 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCN3P51790 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CLCN3P51790 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CLCN3P51790 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCN3P51790 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.54■□□□□ 0.4
CLCN3P51790 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLCN3P51790 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLCN3P51790 MIR648-201ENST00000385046 94 ntBASIC17.54■□□□□ 0.4
CLCN3P51790 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.54■□□□□ 0.4
CLCN3P51790 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCN3P51790 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCN3P51790 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCN3P51790 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.54■□□□□ 0.4
CLCN3P51790 AL391069.4-201ENST00000609583 481 ntBASIC17.54■□□□□ 0.4
CLCN3P51790 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCN3P51790 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CLCN3P51790 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLCN3P51790 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN3P51790 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms