Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TM4SF4P48230 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
TM4SF4P48230 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 RNU1-114P-201ENST00000365297 166 ntBASIC17.95■□□□□ 0.46
TM4SF4P48230 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TM4SF4P48230 FAM8A4P-201ENST00000435433 1213 ntBASIC17.95■□□□□ 0.46
TM4SF4P48230 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TM4SF4P48230 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.95■□□□□ 0.46
TM4SF4P48230 AL161670.2-201ENST00000557650 1227 ntBASIC17.95■□□□□ 0.46
TM4SF4P48230 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.95■□□□□ 0.46
TM4SF4P48230 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TM4SF4P48230 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF4P48230 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF4P48230 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.95■□□□□ 0.46
TM4SF4P48230 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM4SF4P48230 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.95■□□□□ 0.46
TM4SF4P48230 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF4P48230 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TM4SF4P48230 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TM4SF4P48230 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF4P48230 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.95■□□□□ 0.46
TM4SF4P48230 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF4P48230 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 PCDHB18P-201ENST00000524813 2368 ntBASIC17.94■□□□□ 0.46
TM4SF4P48230 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 DPM3-202ENST00000368399 517 ntBASIC17.94■□□□□ 0.46
TM4SF4P48230 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.94■□□□□ 0.46
TM4SF4P48230 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF4P48230 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TM4SF4P48230 AC012618.1-201ENST00000461223 412 ntBASIC17.94■□□□□ 0.46
TM4SF4P48230 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF4P48230 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.94■□□□□ 0.46
TM4SF4P48230 AC005740.2-201ENST00000511085 419 ntBASIC17.94■□□□□ 0.46
TM4SF4P48230 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.94■□□□□ 0.46
TM4SF4P48230 AC005730.2-201ENST00000564549 1184 ntBASIC17.94■□□□□ 0.46
TM4SF4P48230 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 AF254983.2-201ENST00000612331 135 ntBASIC17.94■□□□□ 0.46
TM4SF4P48230 ENPP7P14-201ENST00000621765 1040 ntBASIC17.94■□□□□ 0.46
TM4SF4P48230 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF4P48230 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
TM4SF4P48230 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 AC060834.1-201ENST00000443027 2032 ntBASIC17.94■□□□□ 0.46
TM4SF4P48230 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TM4SF4P48230 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TM4SF4P48230 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF4P48230 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TM4SF4P48230 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF4P48230 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TM4SF4P48230 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF4P48230 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TM4SF4P48230 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF4P48230 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.93■□□□□ 0.46
TM4SF4P48230 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF4P48230 PPY2P-201ENST00000582808 702 ntBASIC17.93■□□□□ 0.46
TM4SF4P48230 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
TM4SF4P48230 AC026740.1-201ENST00000607068 791 ntBASIC17.93■□□□□ 0.46
TM4SF4P48230 AC022748.3-201ENST00000621828 275 ntBASIC17.93■□□□□ 0.46
TM4SF4P48230 PRSS30P-206ENST00000641773 873 ntBASIC17.93■□□□□ 0.46
TM4SF4P48230 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF4P48230 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms