Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 SPDYE19P-201ENST00000338590 713 ntBASIC16.42■□□□□ 0.22
SLC6A4P31645 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
SLC6A4P31645 TARDBPP1-201ENST00000442013 1203 ntBASIC16.42■□□□□ 0.22
SLC6A4P31645 DOC2GP-202ENST00000514950 1163 ntBASIC16.42■□□□□ 0.22
SLC6A4P31645 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC6A4P31645 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC6A4P31645 AC190387.1-201ENST00000551683 408 ntBASIC16.42■□□□□ 0.22
SLC6A4P31645 AL450472.2-201ENST00000603663 1156 ntBASIC16.42■□□□□ 0.22
SLC6A4P31645 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
SLC6A4P31645 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A4P31645 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A4P31645 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC6A4P31645 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC6A4P31645 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC6A4P31645 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A4P31645 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 AC124067.4-201ENST00000519691 2379 ntBASIC16.41■□□□□ 0.22
SLC6A4P31645 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A4P31645 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A4P31645 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SLC6A4P31645 PIN1P1-201ENST00000412108 996 ntBASIC16.41■□□□□ 0.22
SLC6A4P31645 CRB3P1-201ENST00000449338 276 ntBASIC16.41■□□□□ 0.22
SLC6A4P31645 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A4P31645 LINC02447-202ENST00000501888 2146 ntBASIC16.41■□□□□ 0.22
SLC6A4P31645 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A4P31645 HNRNPUP1-201ENST00000554987 333 ntBASIC16.41■□□□□ 0.22
SLC6A4P31645 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC6A4P31645 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
SLC6A4P31645 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC6A4P31645 AL132655.2-201ENST00000596276 594 ntBASIC16.41■□□□□ 0.22
SLC6A4P31645 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 AC024909.3-201ENST00000611513 2257 ntBASIC16.41■□□□□ 0.22
SLC6A4P31645 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SLC6A4P31645 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC6A4P31645 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A4P31645 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SLC6A4P31645 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLC6A4P31645 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A4P31645 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC6A4P31645 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 AL603832.2-201ENST00000566195 2125 ntBASIC16.4■□□□□ 0.22
SLC6A4P31645 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC6A4P31645 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC6A4P31645 AC018695.7-201ENST00000624587 2492 ntBASIC16.4■□□□□ 0.22
SLC6A4P31645 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC6A4P31645 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC6A4P31645 AC015922.1-201ENST00000421102 1152 ntBASIC16.4■□□□□ 0.22
SLC6A4P31645 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A4P31645 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A4P31645 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A4P31645 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A4P31645 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A4P31645 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A4P31645 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A4P31645 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A4P31645 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC6A4P31645 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A4P31645 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC6A4P31645 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A4P31645 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms