Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PTPN6P29350 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN6P29350 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PTPN6P29350 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN6P29350 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN6P29350 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN6P29350 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 AC002056.1-201ENST00000395613 760 ntBASIC15.26■□□□□ 0.03
PTPN6P29350 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN6P29350 CEND1P1-201ENST00000451006 455 ntBASIC15.26■□□□□ 0.03
PTPN6P29350 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.26■□□□□ 0.03
PTPN6P29350 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 AC134684.3-201ENST00000641758 218 ntBASIC15.26■□□□□ 0.03
PTPN6P29350 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 AL109954.1-202ENST00000564051 2148 ntBASIC15.26■□□□□ 0.03
PTPN6P29350 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN6P29350 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 AC105250.1-201ENST00000509378 2057 ntBASIC15.25■□□□□ 0.03
PTPN6P29350 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.25■□□□□ 0.03
PTPN6P29350 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
PTPN6P29350 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PTPN6P29350 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN6P29350 AP001282.1-201ENST00000531301 1499 ntBASIC15.25■□□□□ 0.03
PTPN6P29350 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN6P29350 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
PTPN6P29350 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN6P29350 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN6P29350 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms