Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.55□□□□□ -0.08
GDF1P27539 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.55□□□□□ -0.08
GDF1P27539 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.55□□□□□ -0.08
GDF1P27539 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
GDF1P27539 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.55□□□□□ -0.08
GDF1P27539 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 AC004840.1-201ENST00000636359 365 ntBASIC14.55□□□□□ -0.08
GDF1P27539 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
GDF1P27539 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 BTBD7P1-201ENST00000447253 1453 ntBASIC14.55□□□□□ -0.08
GDF1P27539 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.55□□□□□ -0.08
GDF1P27539 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.54□□□□□ -0.08
GDF1P27539 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GDF1P27539 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.54□□□□□ -0.08
GDF1P27539 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GDF1P27539 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 FO393414.2-201ENST00000405153 598 ntBASIC14.54□□□□□ -0.08
GDF1P27539 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.54□□□□□ -0.08
GDF1P27539 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.54□□□□□ -0.08
GDF1P27539 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.54□□□□□ -0.08
GDF1P27539 COX20P2-201ENST00000452636 358 ntBASIC14.54□□□□□ -0.08
GDF1P27539 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.54□□□□□ -0.08
GDF1P27539 SDHAP3-202ENST00000515467 728 ntBASIC14.54□□□□□ -0.08
GDF1P27539 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 ZNF890P-202ENST00000530367 1156 ntBASIC14.54□□□□□ -0.08
GDF1P27539 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.54□□□□□ -0.08
GDF1P27539 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.54□□□□□ -0.08
GDF1P27539 AC104794.3-201ENST00000566840 1248 ntBASIC14.54□□□□□ -0.08
GDF1P27539 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.54□□□□□ -0.08
GDF1P27539 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GDF1P27539 AL109936.8-201ENST00000641772 604 ntBASIC14.54□□□□□ -0.08
GDF1P27539 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.54□□□□□ -0.08
GDF1P27539 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 KRT8P37-201ENST00000451609 1420 ntBASIC14.54□□□□□ -0.08
GDF1P27539 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.54□□□□□ -0.08
GDF1P27539 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
GDF1P27539 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
GDF1P27539 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GDF1P27539 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GDF1P27539 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
GDF1P27539 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
GDF1P27539 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GDF1P27539 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GDF1P27539 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GDF1P27539 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GDF1P27539 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms