Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMLP26374 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMLP26374 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMLP26374 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMLP26374 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.33■□□□□ 0.68
CHMLP26374 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMLP26374 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMLP26374 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMLP26374 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMLP26374 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMLP26374 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMLP26374 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMLP26374 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHMLP26374 AC090616.6-203ENST00000579186 1945 ntBASIC19.32■□□□□ 0.68
CHMLP26374 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMLP26374 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.32■□□□□ 0.68
CHMLP26374 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMLP26374 PHKG1P2-201ENST00000457537 863 ntBASIC19.32■□□□□ 0.68
CHMLP26374 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.32■□□□□ 0.68
CHMLP26374 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMLP26374 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMLP26374 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.32■□□□□ 0.68
CHMLP26374 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMLP26374 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMLP26374 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMLP26374 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMLP26374 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMLP26374 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMLP26374 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.31■□□□□ 0.68
CHMLP26374 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMLP26374 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMLP26374 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMLP26374 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMLP26374 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHMLP26374 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHMLP26374 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMLP26374 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 AC023141.5-201ENST00000458585 616 ntBASIC19.31■□□□□ 0.68
CHMLP26374 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHMLP26374 AL450472.2-201ENST00000603663 1156 ntBASIC19.31■□□□□ 0.68
CHMLP26374 AC097359.3-201ENST00000603982 1210 ntBASIC19.31■□□□□ 0.68
CHMLP26374 AL133215.2-201ENST00000609242 977 ntBASIC19.31■□□□□ 0.68
CHMLP26374 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMLP26374 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMLP26374 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMLP26374 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CHMLP26374 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHMLP26374 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.3■□□□□ 0.68
CHMLP26374 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMLP26374 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMLP26374 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMLP26374 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHMLP26374 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMLP26374 AC254562.1-201ENST00000417586 456 ntBASIC19.3■□□□□ 0.68
CHMLP26374 AL353705.2-201ENST00000428243 662 ntBASIC19.3■□□□□ 0.68
CHMLP26374 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMLP26374 AP006288.1-201ENST00000446065 395 ntBASIC19.3■□□□□ 0.68
CHMLP26374 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMLP26374 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMLP26374 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms