Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 AC093909.1-201ENST00000504731 1122 ntBASIC15.03■□□□□ -0
NR4A1P22736 RNA5SP419-201ENST00000515908 135 ntBASIC15.03■□□□□ -0
NR4A1P22736 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.03■□□□□ -0
NR4A1P22736 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.03■□□□□ -0
NR4A1P22736 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.03■□□□□ -0
NR4A1P22736 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.03■□□□□ -0
NR4A1P22736 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NR4A1P22736 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.03■□□□□ -0
NR4A1P22736 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 MIR600HG-201ENST00000449175 5984 ntBASIC15.03■□□□□ -0
NR4A1P22736 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 GGT3P-204ENST00000453783 1664 ntBASIC15.03■□□□□ -0
NR4A1P22736 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NR4A1P22736 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A1P22736 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.02■□□□□ -0
NR4A1P22736 PTENP1-202ENST00000532280 3996 ntBASIC15.02■□□□□ -0
NR4A1P22736 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.02■□□□□ -0
NR4A1P22736 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NR4A1P22736 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.02■□□□□ -0
NR4A1P22736 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.02■□□□□ -0
NR4A1P22736 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A1P22736 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.02■□□□□ -0
NR4A1P22736 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.02■□□□□ -0
NR4A1P22736 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.02■□□□□ -0
NR4A1P22736 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.02■□□□□ -0
NR4A1P22736 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.02■□□□□ -0
NR4A1P22736 AL589182.2-201ENST00000619332 1049 ntBASIC15.02■□□□□ -0
NR4A1P22736 FAM215A-202ENST00000632077 792 ntBASIC15.02■□□□□ -0
NR4A1P22736 AC107918.4-202ENST00000641623 219 ntBASIC15.02■□□□□ -0
NR4A1P22736 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.02□□□□□ -0.01
NR4A1P22736 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.02□□□□□ -0.01
NR4A1P22736 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.02□□□□□ -0.01
NR4A1P22736 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
NR4A1P22736 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.02□□□□□ -0.01
NR4A1P22736 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.02□□□□□ -0.01
NR4A1P22736 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NR4A1P22736 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 ST20-AS1-201ENST00000560255 4223 ntBASIC15.02□□□□□ -0.01
NR4A1P22736 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NR4A1P22736 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A1P22736 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.02□□□□□ -0.01
NR4A1P22736 AC117489.1-201ENST00000625169 3217 ntBASIC15.02□□□□□ -0.01
NR4A1P22736 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR4A1P22736 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR4A1P22736 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR4A1P22736 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NR4A1P22736 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NR4A1P22736 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR4A1P22736 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR4A1P22736 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NR4A1P22736 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR4A1P22736 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NR4A1P22736 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.01□□□□□ -0.01
NR4A1P22736 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms