Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL1P22362 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL1P22362 AC138035.3-201ENST00000622706 2791 ntBASIC13.82□□□□□ -0.2
CCL1P22362 AC112693.3-201ENST00000624819 1983 ntBASIC13.82□□□□□ -0.2
CCL1P22362 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 CYP4F24P-201ENST00000586049 1580 ntBASIC13.81□□□□□ -0.2
CCL1P22362 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CCL1P22362 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 SPCS2P4-201ENST00000436160 681 ntBASIC13.81□□□□□ -0.2
CCL1P22362 AL139010.1-201ENST00000454878 894 ntBASIC13.81□□□□□ -0.2
CCL1P22362 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.81□□□□□ -0.2
CCL1P22362 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.81□□□□□ -0.2
CCL1P22362 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.81□□□□□ -0.2
CCL1P22362 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.81□□□□□ -0.2
CCL1P22362 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCL1P22362 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCL1P22362 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL1P22362 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL1P22362 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL1P22362 MCCD1P2-201ENST00000423228 335 ntBASIC13.8□□□□□ -0.2
CCL1P22362 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL1P22362 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL1P22362 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL1P22362 AL450472.2-201ENST00000603663 1156 ntBASIC13.8□□□□□ -0.2
CCL1P22362 AC026120.1-201ENST00000611536 926 ntBASIC13.8□□□□□ -0.2
CCL1P22362 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL1P22362 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 KRT8P37-201ENST00000451609 1420 ntBASIC13.8□□□□□ -0.2
CCL1P22362 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL1P22362 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL1P22362 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL1P22362 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL1P22362 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms