Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.98■□□□□ 0.31
PTPN1P18031 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN1P18031 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PTPN1P18031 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN1P18031 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 FAM207CP-201ENST00000443486 507 ntBASIC16.97■□□□□ 0.31
PTPN1P18031 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN1P18031 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN1P18031 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN1P18031 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.97■□□□□ 0.31
PTPN1P18031 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN1P18031 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN1P18031 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.97■□□□□ 0.31
PTPN1P18031 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PTPN1P18031 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 BTBD7P1-201ENST00000447253 1453 ntBASIC16.97■□□□□ 0.31
PTPN1P18031 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN1P18031 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN1P18031 REXO1L1P-202ENST00000608646 1974 ntBASIC16.97■□□□□ 0.31
PTPN1P18031 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN1P18031 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN1P18031 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN1P18031 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN1P18031 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PTPN1P18031 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN1P18031 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 PHKG1P2-201ENST00000457537 863 ntBASIC16.96■□□□□ 0.31
PTPN1P18031 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTPN1P18031 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN1P18031 SERBP1P5-201ENST00000510079 1181 ntBASIC16.96■□□□□ 0.31
PTPN1P18031 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.96■□□□□ 0.31
PTPN1P18031 AC135586.1-201ENST00000539323 574 ntBASIC16.96■□□□□ 0.31
PTPN1P18031 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.96■□□□□ 0.31
PTPN1P18031 AC008761.3-201ENST00000624803 892 ntBASIC16.96■□□□□ 0.31
PTPN1P18031 AL109936.8-201ENST00000641772 604 ntBASIC16.96■□□□□ 0.31
PTPN1P18031 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PTPN1P18031 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
PTPN1P18031 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 NFIC-211ENST00000641145 8399 ntBASIC16.96■□□□□ 0.31
PTPN1P18031 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN1P18031 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PTPN1P18031 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN1P18031 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PTPN1P18031 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.96■□□□□ 0.3
PTPN1P18031 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PTPN1P18031 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.96■□□□□ 0.3
PTPN1P18031 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN1P18031 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTPN1P18031 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN1P18031 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 AC008741.2-201ENST00000612792 3115 ntBASIC16.95■□□□□ 0.3
PTPN1P18031 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 DOC2GP-204ENST00000639052 2548 ntBASIC16.95■□□□□ 0.3
PTPN1P18031 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 AL391005.1-201ENST00000623953 2435 ntBASIC16.95■□□□□ 0.3
PTPN1P18031 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN1P18031 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN1P18031 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.95■□□□□ 0.3
PTPN1P18031 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN1P18031 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN1P18031 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN1P18031 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN1P18031 AC025048.3-201ENST00000590609 569 ntBASIC16.95■□□□□ 0.3
PTPN1P18031 AC005702.4-201ENST00000618393 416 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms