Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 AZGP1P1-201ENST00000411909 902 ntBASIC18.12■□□□□ 0.49
GCFC2P16383 AC241585.1-201ENST00000433527 519 ntBASIC18.12■□□□□ 0.49
GCFC2P16383 IGHV3-42-201ENST00000520410 361 ntBASIC18.12■□□□□ 0.49
GCFC2P16383 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GCFC2P16383 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.12■□□□□ 0.49
GCFC2P16383 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.12■□□□□ 0.49
GCFC2P16383 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.12■□□□□ 0.49
GCFC2P16383 AC087499.5-201ENST00000452760 1342 ntBASIC18.12■□□□□ 0.49
GCFC2P16383 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCFC2P16383 AC100757.3-201ENST00000622361 1406 ntBASIC18.12■□□□□ 0.49
GCFC2P16383 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.12■□□□□ 0.49
GCFC2P16383 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.12■□□□□ 0.49
GCFC2P16383 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCFC2P16383 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCFC2P16383 AC010491.1-201ENST00000563101 2797 ntBASIC18.12■□□□□ 0.49
GCFC2P16383 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.12■□□□□ 0.49
GCFC2P16383 AC022188.1-201ENST00000620960 1664 ntBASIC18.12■□□□□ 0.49
GCFC2P16383 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCFC2P16383 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCFC2P16383 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GCFC2P16383 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.11■□□□□ 0.49
GCFC2P16383 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
GCFC2P16383 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.11■□□□□ 0.49
GCFC2P16383 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.11■□□□□ 0.49
GCFC2P16383 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.11■□□□□ 0.49
GCFC2P16383 ZNF890P-202ENST00000530367 1156 ntBASIC18.11■□□□□ 0.49
GCFC2P16383 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 AL390955.2-201ENST00000603032 514 ntBASIC18.11■□□□□ 0.49
GCFC2P16383 AL590560.3-201ENST00000623350 461 ntBASIC18.11■□□□□ 0.49
GCFC2P16383 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.11■□□□□ 0.49
GCFC2P16383 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.11■□□□□ 0.49
GCFC2P16383 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.11■□□□□ 0.49
GCFC2P16383 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCFC2P16383 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 LINC00554-201ENST00000564841 3011 ntBASIC18.1■□□□□ 0.49
GCFC2P16383 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GCFC2P16383 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.1■□□□□ 0.49
GCFC2P16383 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GCFC2P16383 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GCFC2P16383 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 RN7SL618P-201ENST00000477850 296 ntBASIC18.1■□□□□ 0.49
GCFC2P16383 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.1■□□□□ 0.49
GCFC2P16383 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GCFC2P16383 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.1■□□□□ 0.49
GCFC2P16383 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GCFC2P16383 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.1■□□□□ 0.49
GCFC2P16383 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.1■□□□□ 0.49
GCFC2P16383 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCFC2P16383 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms