Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 LTB4R2-202ENST00000528054 3092 ntBASIC16.84■□□□□ 0.29
RB1P06400 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.84■□□□□ 0.29
RB1P06400 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RB1P06400 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RB1P06400 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RB1P06400 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RB1P06400 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RB1P06400 ELK2AP-201ENST00000392510 1007 ntBASIC16.83■□□□□ 0.28
RB1P06400 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.83■□□□□ 0.28
RB1P06400 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.83■□□□□ 0.28
RB1P06400 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.83■□□□□ 0.28
RB1P06400 FAM86HP-204ENST00000513466 959 ntBASIC16.83■□□□□ 0.28
RB1P06400 AC026410.3-201ENST00000514280 936 ntBASIC16.83■□□□□ 0.28
RB1P06400 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.83■□□□□ 0.28
RB1P06400 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.83■□□□□ 0.28
RB1P06400 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.83■□□□□ 0.28
RB1P06400 GNRHR2-203ENST00000581100 1187 ntBASIC16.83■□□□□ 0.28
RB1P06400 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RB1P06400 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RB1P06400 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RB1P06400 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.83■□□□□ 0.28
RB1P06400 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.82■□□□□ 0.28
RB1P06400 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RB1P06400 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.82■□□□□ 0.28
RB1P06400 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RB1P06400 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.82■□□□□ 0.28
RB1P06400 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 AP001282.1-201ENST00000531301 1499 ntBASIC16.82■□□□□ 0.28
RB1P06400 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 AC006001.1-201ENST00000325130 474 ntBASIC16.82■□□□□ 0.28
RB1P06400 MIR326-201ENST00000362220 95 ntBASIC16.82■□□□□ 0.28
RB1P06400 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 CALR4P-201ENST00000431943 946 ntBASIC16.82■□□□□ 0.28
RB1P06400 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.82■□□□□ 0.28
RB1P06400 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.82■□□□□ 0.28
RB1P06400 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RB1P06400 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.82■□□□□ 0.28
RB1P06400 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RB1P06400 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.82■□□□□ 0.28
RB1P06400 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.82■□□□□ 0.28
RB1P06400 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.82■□□□□ 0.28
RB1P06400 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.82■□□□□ 0.28
RB1P06400 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.82■□□□□ 0.28
RB1P06400 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.82■□□□□ 0.28
RB1P06400 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.82■□□□□ 0.28
RB1P06400 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.82■□□□□ 0.28
RB1P06400 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.82■□□□□ 0.28
RB1P06400 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.82■□□□□ 0.28
RB1P06400 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RB1P06400 REXO1L8P-201ENST00000604378 1897 ntBASIC16.82■□□□□ 0.28
RB1P06400 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RB1P06400 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.82■□□□□ 0.28
RB1P06400 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RB1P06400 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.82■□□□□ 0.28
RB1P06400 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.81■□□□□ 0.28
RB1P06400 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RB1P06400 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.81■□□□□ 0.28
RB1P06400 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.81■□□□□ 0.28
RB1P06400 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RB1P06400 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms