Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
APOA1P02647 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 KRT17P2-201ENST00000300992 1314 ntBASIC14.41□□□□□ -0.1
APOA1P02647 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 SNX33P1-201ENST00000592116 1762 ntBASIC14.4□□□□□ -0.1
APOA1P02647 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOA1P02647 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
APOA1P02647 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 MIR648-201ENST00000385046 94 ntBASIC14.4□□□□□ -0.1
APOA1P02647 MIR718-201ENST00000390190 70 ntBASIC14.4□□□□□ -0.1
APOA1P02647 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 GUSBP12-201ENST00000513727 720 ntBASIC14.4□□□□□ -0.1
APOA1P02647 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.4□□□□□ -0.1
APOA1P02647 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
APOA1P02647 AC041040.2-201ENST00000622926 2899 ntBASIC14.4□□□□□ -0.1
APOA1P02647 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOA1P02647 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
APOA1P02647 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.4□□□□□ -0.1
APOA1P02647 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.4□□□□□ -0.1
APOA1P02647 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.4□□□□□ -0.1
APOA1P02647 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
APOA1P02647 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 Z83836.1-201ENST00000624605 1642 ntBASIC14.4□□□□□ -0.1
APOA1P02647 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOA1P02647 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOA1P02647 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
APOA1P02647 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.39□□□□□ -0.11
APOA1P02647 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
APOA1P02647 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOA1P02647 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOA1P02647 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.39□□□□□ -0.11
APOA1P02647 LINC01144-201ENST00000626198 1710 ntBASIC14.39□□□□□ -0.11
APOA1P02647 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
APOA1P02647 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.39□□□□□ -0.11
APOA1P02647 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
APOA1P02647 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA1P02647 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 NUS1P1-201ENST00000446295 882 ntBASIC14.39□□□□□ -0.11
APOA1P02647 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.39□□□□□ -0.11
APOA1P02647 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.39□□□□□ -0.11
APOA1P02647 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA1P02647 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.39□□□□□ -0.11
APOA1P02647 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.39□□□□□ -0.11
APOA1P02647 AC005336.2-201ENST00000593183 939 ntBASIC14.39□□□□□ -0.11
APOA1P02647 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.39□□□□□ -0.11
APOA1P02647 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.39□□□□□ -0.11
APOA1P02647 AC073592.5-201ENST00000624854 528 ntBASIC14.39□□□□□ -0.11
APOA1P02647 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
APOA1P02647 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOA1P02647 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.39□□□□□ -0.11
APOA1P02647 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms