Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.79□□□□□ -0.04
NKX2-2O95096 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.79□□□□□ -0.04
NKX2-2O95096 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.79□□□□□ -0.04
NKX2-2O95096 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.79□□□□□ -0.04
NKX2-2O95096 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.79□□□□□ -0.04
NKX2-2O95096 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 MIR4313-201ENST00000580760 101 ntBASIC14.79□□□□□ -0.04
NKX2-2O95096 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.79□□□□□ -0.04
NKX2-2O95096 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.78□□□□□ -0.04
NKX2-2O95096 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.78□□□□□ -0.04
NKX2-2O95096 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.78□□□□□ -0.04
NKX2-2O95096 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
NKX2-2O95096 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 FO393414.2-201ENST00000405153 598 ntBASIC14.78□□□□□ -0.04
NKX2-2O95096 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NKX2-2O95096 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 MTND6P24-201ENST00000440466 518 ntBASIC14.78□□□□□ -0.04
NKX2-2O95096 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.78□□□□□ -0.04
NKX2-2O95096 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NKX2-2O95096 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NKX2-2O95096 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-2O95096 AP003680.1-201ENST00000598970 3660 ntBASIC14.78□□□□□ -0.04
NKX2-2O95096 CICP6-201ENST00000457191 2729 ntBASIC14.78□□□□□ -0.04
NKX2-2O95096 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
NKX2-2O95096 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-2O95096 AC046158.3-201ENST00000624947 2558 ntBASIC14.78□□□□□ -0.04
NKX2-2O95096 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.77□□□□□ -0.04
NKX2-2O95096 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.77□□□□□ -0.04
NKX2-2O95096 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NKX2-2O95096 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
NKX2-2O95096 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 KRT8P12-202ENST00000472924 1397 ntBASIC14.77□□□□□ -0.04
NKX2-2O95096 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.77□□□□□ -0.04
NKX2-2O95096 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NKX2-2O95096 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-2O95096 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.77□□□□□ -0.04
NKX2-2O95096 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.77□□□□□ -0.04
NKX2-2O95096 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms