Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SMARCA5O60264 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SMARCA5O60264 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCA5O60264 MTND6P24-201ENST00000440466 518 ntBASIC19.8■□□□□ 0.76
SMARCA5O60264 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.8■□□□□ 0.76
SMARCA5O60264 AL139010.1-201ENST00000454878 894 ntBASIC19.8■□□□□ 0.76
SMARCA5O60264 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCA5O60264 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCA5O60264 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.8■□□□□ 0.76
SMARCA5O60264 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.8■□□□□ 0.76
SMARCA5O60264 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.8■□□□□ 0.76
SMARCA5O60264 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCA5O60264 REXO1L1P-202ENST00000608646 1974 ntBASIC19.8■□□□□ 0.76
SMARCA5O60264 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SMARCA5O60264 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCA5O60264 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCA5O60264 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCA5O60264 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SMARCA5O60264 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCA5O60264 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SMARCA5O60264 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SMARCA5O60264 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCA5O60264 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.79■□□□□ 0.76
SMARCA5O60264 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCA5O60264 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.79■□□□□ 0.76
SMARCA5O60264 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.79■□□□□ 0.76
SMARCA5O60264 RN7SL828P-201ENST00000607615 303 ntBASIC19.79■□□□□ 0.76
SMARCA5O60264 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SMARCA5O60264 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SMARCA5O60264 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCA5O60264 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCA5O60264 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
SMARCA5O60264 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCA5O60264 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCA5O60264 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SMARCA5O60264 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SMARCA5O60264 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SMARCA5O60264 AC004987.2-201ENST00000395959 1148 ntBASIC19.78■□□□□ 0.76
SMARCA5O60264 AL353705.2-201ENST00000428243 662 ntBASIC19.78■□□□□ 0.76
SMARCA5O60264 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCA5O60264 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 AC069262.1-201ENST00000539058 672 ntBASIC19.78■□□□□ 0.76
SMARCA5O60264 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCA5O60264 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.78■□□□□ 0.76
SMARCA5O60264 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.78■□□□□ 0.76
SMARCA5O60264 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 AC007967.4-201ENST00000614700 386 ntBASIC19.78■□□□□ 0.76
SMARCA5O60264 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SMARCA5O60264 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCA5O60264 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCA5O60264 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 AC092127.1-201ENST00000567093 3455 ntBASIC19.77■□□□□ 0.76
SMARCA5O60264 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SMARCA5O60264 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SMARCA5O60264 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCA5O60264 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.77■□□□□ 0.76
SMARCA5O60264 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCA5O60264 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMARCA5O60264 AL512356.2-201ENST00000546955 174 ntBASIC19.77■□□□□ 0.76
SMARCA5O60264 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.77■□□□□ 0.76
SMARCA5O60264 AC004449.1-201ENST00000564240 433 ntBASIC19.77■□□□□ 0.76
SMARCA5O60264 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCA5O60264 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCA5O60264 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.77■□□□□ 0.76
SMARCA5O60264 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms