Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.02■□□□□ 0.47
ACTN4O43707 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.02■□□□□ 0.47
ACTN4O43707 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.01■□□□□ 0.47
ACTN4O43707 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ACTN4O43707 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 AC092127.1-201ENST00000567093 3455 ntBASIC18.01■□□□□ 0.47
ACTN4O43707 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.01■□□□□ 0.47
ACTN4O43707 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ACTN4O43707 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ACTN4O43707 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 AC004832.2-201ENST00000426397 482 ntBASIC18.01■□□□□ 0.47
ACTN4O43707 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.01■□□□□ 0.47
ACTN4O43707 POLD2P1-201ENST00000511220 997 ntBASIC18.01■□□□□ 0.47
ACTN4O43707 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.01■□□□□ 0.47
ACTN4O43707 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.01■□□□□ 0.47
ACTN4O43707 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
ACTN4O43707 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.01■□□□□ 0.47
ACTN4O43707 AC090616.6-203ENST00000579186 1945 ntBASIC18.01■□□□□ 0.47
ACTN4O43707 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.01■□□□□ 0.47
ACTN4O43707 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.01■□□□□ 0.47
ACTN4O43707 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.01■□□□□ 0.47
ACTN4O43707 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ACTN4O43707 TMBIM7P-203ENST00000641617 1718 ntBASIC18.01■□□□□ 0.47
ACTN4O43707 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 AC009090.5-201ENST00000624886 2285 ntBASIC18■□□□□ 0.47
ACTN4O43707 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18■□□□□ 0.47
ACTN4O43707 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 SPDYE11-202ENST00000450699 704 ntBASIC18■□□□□ 0.47
ACTN4O43707 ALG1L5P-201ENST00000482043 771 ntBASIC18■□□□□ 0.47
ACTN4O43707 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18■□□□□ 0.47
ACTN4O43707 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 RNA5SP410-201ENST00000516285 106 ntBASIC18■□□□□ 0.47
ACTN4O43707 KRT18P58-201ENST00000527480 1120 ntBASIC18■□□□□ 0.47
ACTN4O43707 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 SPDYE9P-201ENST00000570642 692 ntBASIC18■□□□□ 0.47
ACTN4O43707 MIR4313-201ENST00000580760 101 ntBASIC18■□□□□ 0.47
ACTN4O43707 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 SPDYE10P-202ENST00000612005 668 ntBASIC18■□□□□ 0.47
ACTN4O43707 SPDYE8P-202ENST00000612377 668 ntBASIC18■□□□□ 0.47
ACTN4O43707 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 AC084121.4-201ENST00000641598 221 ntBASIC18■□□□□ 0.47
ACTN4O43707 AF228730.8-201ENST00000642140 221 ntBASIC18■□□□□ 0.47
ACTN4O43707 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 REXO1L1P-202ENST00000608646 1974 ntBASIC18■□□□□ 0.47
ACTN4O43707 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ACTN4O43707 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18■□□□□ 0.47
ACTN4O43707 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18■□□□□ 0.47
ACTN4O43707 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 DBET-201ENST00000630918 3363 ntBASIC17.99■□□□□ 0.47
ACTN4O43707 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ACTN4O43707 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ACTN4O43707 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms