Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HDAC3O15379 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HDAC3O15379 HCG4P8-203ENST00000443049 980 ntBASIC15.67■□□□□ 0.1
HDAC3O15379 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.67■□□□□ 0.1
HDAC3O15379 RNPS1P1-201ENST00000507437 918 ntBASIC15.67■□□□□ 0.1
HDAC3O15379 KRT18P35-201ENST00000510488 1269 ntBASIC15.67■□□□□ 0.1
HDAC3O15379 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.67■□□□□ 0.1
HDAC3O15379 AC109635.5-201ENST00000533593 962 ntBASIC15.67■□□□□ 0.1
HDAC3O15379 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.67■□□□□ 0.1
HDAC3O15379 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.67■□□□□ 0.1
HDAC3O15379 PRELID1P1-202ENST00000567272 903 ntBASIC15.67■□□□□ 0.1
HDAC3O15379 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.67■□□□□ 0.1
HDAC3O15379 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
HDAC3O15379 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 AL009178.2-201ENST00000597278 2719 ntBASIC15.67■□□□□ 0.1
HDAC3O15379 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HDAC3O15379 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HDAC3O15379 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC3O15379 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.66■□□□□ 0.1
HDAC3O15379 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HDAC3O15379 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 LINC01101-201ENST00000622953 1884 ntBASIC15.66■□□□□ 0.1
HDAC3O15379 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HDAC3O15379 PRSS29P-201ENST00000440800 595 ntBASIC15.66■□□□□ 0.1
HDAC3O15379 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC3O15379 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC3O15379 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.66■□□□□ 0.1
HDAC3O15379 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HDAC3O15379 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HDAC3O15379 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HDAC3O15379 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.66■□□□□ 0.1
HDAC3O15379 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HDAC3O15379 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HDAC3O15379 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.65■□□□□ 0.1
HDAC3O15379 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDAC3O15379 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HDAC3O15379 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HDAC3O15379 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HDAC3O15379 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.65■□□□□ 0.1
HDAC3O15379 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HDAC3O15379 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDAC3O15379 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDAC3O15379 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HDAC3O15379 AC091951.1-201ENST00000512854 2465 ntBASIC15.65■□□□□ 0.1
HDAC3O15379 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HDAC3O15379 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HDAC3O15379 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.65■□□□□ 0.1
HDAC3O15379 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms