Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.4■□□□□ 0.06
PDLIM1O00151 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PDLIM1O00151 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.4■□□□□ 0.06
PDLIM1O00151 PRYP5-201ENST00000451909 266 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 SIGLEC30P-201ENST00000455569 941 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 AC018712.1-201ENST00000455767 687 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 AC009078.2-202ENST00000463353 338 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PDLIM1O00151 POU5F1P6-201ENST00000466990 990 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.4■□□□□ 0.06
PDLIM1O00151 NKAPP1-205ENST00000585790 367 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 SLC25A6P4-201ENST00000586535 553 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.4■□□□□ 0.06
PDLIM1O00151 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 KRT8P39-201ENST00000396270 1433 ntBASIC15.4■□□□□ 0.06
PDLIM1O00151 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.4■□□□□ 0.06
PDLIM1O00151 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PDLIM1O00151 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.4■□□□□ 0.06
PDLIM1O00151 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM1O00151 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
PDLIM1O00151 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PDLIM1O00151 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.39■□□□□ 0.05
PDLIM1O00151 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.39■□□□□ 0.05
PDLIM1O00151 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.39■□□□□ 0.05
PDLIM1O00151 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
PDLIM1O00151 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.39■□□□□ 0.05
PDLIM1O00151 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.39■□□□□ 0.05
PDLIM1O00151 AL020989.1-201ENST00000422979 469 ntBASIC15.39■□□□□ 0.05
PDLIM1O00151 KRT18P67-201ENST00000432816 1264 ntBASIC15.39■□□□□ 0.05
PDLIM1O00151 FAM197Y8-203ENST00000450145 560 ntBASIC15.39■□□□□ 0.05
PDLIM1O00151 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 TERC-201ENST00000602385 541 ntBASIC15.39■□□□□ 0.05
PDLIM1O00151 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDLIM1O00151 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDLIM1O00151 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.39■□□□□ 0.05
PDLIM1O00151 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.39■□□□□ 0.05
PDLIM1O00151 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PDLIM1O00151 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDLIM1O00151 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PDLIM1O00151 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.39■□□□□ 0.05
PDLIM1O00151 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDLIM1O00151 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PDLIM1O00151 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.38■□□□□ 0.05
PDLIM1O00151 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.38■□□□□ 0.05
PDLIM1O00151 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PDLIM1O00151 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PDLIM1O00151 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.38■□□□□ 0.05
PDLIM1O00151 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.38■□□□□ 0.05
PDLIM1O00151 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM1O00151 MRPL3P1-201ENST00000400109 1033 ntBASIC15.38■□□□□ 0.05
PDLIM1O00151 LINC00982-205ENST00000420957 435 ntBASIC15.38■□□□□ 0.05
PDLIM1O00151 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.38■□□□□ 0.05
PDLIM1O00151 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.38■□□□□ 0.05
PDLIM1O00151 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.38■□□□□ 0.05
PDLIM1O00151 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms