Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMX2-CTNND1H3BSU7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMX2-CTNND1H3BSU7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
TMX2-CTNND1H3BSU7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.83■□□□□ 0.13
TMX2-CTNND1H3BSU7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMX2-CTNND1H3BSU7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TMX2-CTNND1H3BSU7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TMX2-CTNND1H3BSU7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 SLC25A1P3-201ENST00000395415 828 ntBASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 MRPS18AP1-201ENST00000414458 589 ntBASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC087499.5-201ENST00000452760 1342 ntBASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.83■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 NME2P1-201ENST00000426182 414 ntBASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 AP005018.1-201ENST00000525475 301 ntBASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC013467.2-201ENST00000605472 835 ntBASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMX2-CTNND1H3BSU7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMX2-CTNND1H3BSU7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms