Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 MIR6799-201ENST00000620297 69 ntBASIC18.54■□□□□ 0.56
USP17L11C9JVI0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.54■□□□□ 0.56
USP17L11C9JVI0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 AC015936.2-201ENST00000593177 259 ntBASIC18.53■□□□□ 0.56
USP17L11C9JVI0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 AC008735.3-201ENST00000596646 500 ntBASIC18.53■□□□□ 0.56
USP17L11C9JVI0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 AL391069.4-201ENST00000609583 481 ntBASIC18.53■□□□□ 0.56
USP17L11C9JVI0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP17L11C9JVI0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.52■□□□□ 0.56
USP17L11C9JVI0 RPL13P2-201ENST00000440687 659 ntBASIC18.52■□□□□ 0.56
USP17L11C9JVI0 AC234783.1-201ENST00000441761 496 ntBASIC18.52■□□□□ 0.56
USP17L11C9JVI0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.52■□□□□ 0.56
USP17L11C9JVI0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.52■□□□□ 0.55
USP17L11C9JVI0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP17L11C9JVI0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
USP17L11C9JVI0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP17L11C9JVI0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.52■□□□□ 0.55
USP17L11C9JVI0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.52■□□□□ 0.55
USP17L11C9JVI0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
USP17L11C9JVI0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
USP17L11C9JVI0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP17L11C9JVI0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms