Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
COLCA2A8K830 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.32□□□□□ -0.44
COLCA2A8K830 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.32□□□□□ -0.44
COLCA2A8K830 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
COLCA2A8K830 AC096733.2-201ENST00000609937 1394 ntBASIC12.31□□□□□ -0.44
COLCA2A8K830 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.31□□□□□ -0.44
COLCA2A8K830 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
COLCA2A8K830 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 AC015802.1-201ENST00000588104 1449 ntBASIC12.31□□□□□ -0.44
COLCA2A8K830 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COLCA2A8K830 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.31□□□□□ -0.44
COLCA2A8K830 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.31□□□□□ -0.44
COLCA2A8K830 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.31□□□□□ -0.44
COLCA2A8K830 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC12.31□□□□□ -0.44
COLCA2A8K830 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.31□□□□□ -0.44
COLCA2A8K830 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.31□□□□□ -0.44
COLCA2A8K830 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 AL050303.2-201ENST00000619798 666 ntBASIC12.31□□□□□ -0.44
COLCA2A8K830 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 AL031985.4-201ENST00000642138 673 ntBASIC12.31□□□□□ -0.44
COLCA2A8K830 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
COLCA2A8K830 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.31□□□□□ -0.44
COLCA2A8K830 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.31□□□□□ -0.44
COLCA2A8K830 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
COLCA2A8K830 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
COLCA2A8K830 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
COLCA2A8K830 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 AL049757.1-201ENST00000616842 1596 ntBASIC12.3□□□□□ -0.44
COLCA2A8K830 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.3□□□□□ -0.44
COLCA2A8K830 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.3□□□□□ -0.44
COLCA2A8K830 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 PVRIG2P-201ENST00000435460 978 ntBASIC12.3□□□□□ -0.44
COLCA2A8K830 KSR1P1-201ENST00000446298 240 ntBASIC12.3□□□□□ -0.44
COLCA2A8K830 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.3□□□□□ -0.44
COLCA2A8K830 AC023090.2-201ENST00000625182 2110 ntBASIC12.3□□□□□ -0.44
COLCA2A8K830 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
COLCA2A8K830 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
COLCA2A8K830 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
COLCA2A8K830 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
COLCA2A8K830 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms