Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 AC126335.2-201ENST00000623362 4637 ntBASIC14.01□□□□□ -0.17
HMX3A6NHT5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.01□□□□□ -0.17
HMX3A6NHT5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.01□□□□□ -0.17
HMX3A6NHT5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.01□□□□□ -0.17
HMX3A6NHT5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
HMX3A6NHT5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
HMX3A6NHT5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 AL135999.2-201ENST00000622438 1686 ntBASIC14.01□□□□□ -0.17
HMX3A6NHT5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 CR383656.2-201ENST00000548656 2254 ntBASIC14.01□□□□□ -0.17
HMX3A6NHT5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.01□□□□□ -0.17
HMX3A6NHT5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMX3A6NHT5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.01□□□□□ -0.17
HMX3A6NHT5 AC008677.1-201ENST00000519230 1561 ntBASIC14□□□□□ -0.17
HMX3A6NHT5 AC136759.1-202ENST00000530858 2194 ntBASIC14□□□□□ -0.17
HMX3A6NHT5 TBC1D3P5-201ENST00000579401 1545 ntBASIC14□□□□□ -0.17
HMX3A6NHT5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
HMX3A6NHT5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14□□□□□ -0.17
HMX3A6NHT5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HMX3A6NHT5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14□□□□□ -0.17
HMX3A6NHT5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14□□□□□ -0.17
HMX3A6NHT5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14□□□□□ -0.17
HMX3A6NHT5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14□□□□□ -0.17
HMX3A6NHT5 NTF6B-201ENST00000591913 560 ntBASIC14□□□□□ -0.17
HMX3A6NHT5 AC011498.5-201ENST00000592027 486 ntBASIC14□□□□□ -0.17
HMX3A6NHT5 IGHV3-41-201ENST00000613121 348 ntBASIC14□□□□□ -0.17
HMX3A6NHT5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14□□□□□ -0.17
HMX3A6NHT5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HMX3A6NHT5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
HMX3A6NHT5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 AC112693.3-201ENST00000624819 1983 ntBASIC14□□□□□ -0.17
HMX3A6NHT5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
HMX3A6NHT5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMX3A6NHT5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.99□□□□□ -0.17
HMX3A6NHT5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMX3A6NHT5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms