Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM235A6NFC5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AC092127.1-201ENST00000567093 3455 ntBASIC13.78□□□□□ -0.2
TMEM235A6NFC5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AC090616.6-203ENST00000579186 1945 ntBASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AC091951.1-201ENST00000512854 2465 ntBASIC13.78□□□□□ -0.2
TMEM235A6NFC5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 ATP5G2P1-201ENST00000433580 426 ntBASIC13.78□□□□□ -0.2
TMEM235A6NFC5 FGFR3P6-201ENST00000457012 610 ntBASIC13.78□□□□□ -0.2
TMEM235A6NFC5 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.78□□□□□ -0.2
TMEM235A6NFC5 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AC006557.2-201ENST00000592985 1240 ntBASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AP000550.4-202ENST00000639755 178 ntBASIC13.78□□□□□ -0.2
TMEM235A6NFC5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM235A6NFC5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM235A6NFC5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM235A6NFC5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM235A6NFC5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM235A6NFC5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TMEM235A6NFC5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM235A6NFC5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.77□□□□□ -0.2
TMEM235A6NFC5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
TMEM235A6NFC5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
TMEM235A6NFC5 AC105250.1-201ENST00000509378 2057 ntBASIC13.77□□□□□ -0.21
TMEM235A6NFC5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms