Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 AC112492.5-201ENST00000421897 457 ntBASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 ACA64.2-201ENST00000459014 129 ntBASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 RN7SL399P-201ENST00000471648 279 ntBASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 AC106886.1-201ENST00000568660 600 ntBASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 FLJ38576-201ENST00000623820 2459 ntBASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 ME2P1-201ENST00000426028 1970 ntBASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 EEF1DP4-201ENST00000446006 880 ntBASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 AC007389.4-201ENST00000454674 793 ntBASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 AC092552.1-201ENST00000547243 906 ntBASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 AC036164.1-201ENST00000570544 333 ntBASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
TBC1D3BA6NDS4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3BA6NDS4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms