Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 SOCS2P1-201ENST00000417727 557 ntBASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 AC134915.1-201ENST00000426461 574 ntBASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 TARDBPP1-201ENST00000442013 1203 ntBASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 AL583810.1-201ENST00000553344 1045 ntBASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 AL606495.2-201ENST00000605867 535 ntBASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 AC093525.8-201ENST00000624099 1342 ntBASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC187A0A096LP49 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 AC005229.1-201ENST00000392885 409 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 FAM21FP-201ENST00000426241 1131 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 AL355864.2-201ENST00000447420 863 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 BCRP2-202ENST00000447763 634 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 AL355994.2-201ENST00000447882 704 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 BCRP6-201ENST00000510112 632 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 BCRP7-201ENST00000511549 544 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 AC068587.3-201ENST00000526613 355 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 TUBB1P2-201ENST00000422712 1306 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 TUBB1P1-201ENST00000503144 1300 ntBASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC187A0A096LP49 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 AC124067.4-201ENST00000519691 2379 ntBASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC187A0A096LP49 AL592424.1-201ENST00000563624 1536 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms