Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 FAM86EP-206ENST00000510506 987 ntBASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 AC012615.1-201ENST00000565797 1299 ntBASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 AC004706.3-202ENST00000621574 984 ntBASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV18A0A075B6X5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 AC023908.3-201ENST00000564211 3047 ntBASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 RCN1P1-201ENST00000400413 996 ntBASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 AC116407.4-201ENST00000623319 1061 ntBASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 AC090616.6-203ENST00000579186 1945 ntBASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV18A0A075B6X5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV18A0A075B6X5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms