Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGB6Q9Y5F9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 RBPMS2P1-201ENST00000437762 623 ntBASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 BCRP1-201ENST00000444246 691 ntBASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.27■□□□□ 0.04
PCDHGB6Q9Y5F9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGB6Q9Y5F9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB6Q9Y5F9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms