Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 AC055876.3-201ENST00000431496 288 ntBASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 AC005498.2-205ENST00000593218 784 ntBASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 AL158211.3-201ENST00000607385 239 ntBASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 AC138649.4-201ENST00000612222 287 ntBASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGC4Q9Y5F7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 HLA-V-204ENST00000476601 1289 ntBASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGC4Q9Y5F7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGC4Q9Y5F7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.21■□□□□ 0.18
PCDHGC4Q9Y5F7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGC4Q9Y5F7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGC4Q9Y5F7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGC4Q9Y5F7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 AC008894.3-201ENST00000624324 3103 ntBASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 AC112504.1-201ENST00000623415 1841 ntBASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 SPDYE17-201ENST00000412399 783 ntBASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGC4Q9Y5F7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms