Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 AL442647.2-201ENST00000429864 857 ntBASIC16.67■□□□□ 0.26
YIPF1Q9Y548 FAM86LP-201ENST00000478302 853 ntBASIC16.67■□□□□ 0.26
YIPF1Q9Y548 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 AC008735.3-201ENST00000596646 500 ntBASIC16.67■□□□□ 0.26
YIPF1Q9Y548 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 AC026471.1-201ENST00000564629 3026 ntBASIC16.66■□□□□ 0.26
YIPF1Q9Y548 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 MIR1909-201ENST00000411312 80 ntBASIC16.66■□□□□ 0.26
YIPF1Q9Y548 TOMM22P5-201ENST00000416399 439 ntBASIC16.66■□□□□ 0.26
YIPF1Q9Y548 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 AC010319.3-201ENST00000597028 470 ntBASIC16.66■□□□□ 0.26
YIPF1Q9Y548 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 RPSAP52-203ENST00000622976 1023 ntBASIC16.66■□□□□ 0.26
YIPF1Q9Y548 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
YIPF1Q9Y548 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 MIR648-201ENST00000385046 94 ntBASIC16.65■□□□□ 0.26
YIPF1Q9Y548 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 AC015936.2-201ENST00000593177 259 ntBASIC16.65■□□□□ 0.26
YIPF1Q9Y548 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 240.8 ms