Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AC064862.7-201ENST00000604520 867 ntBASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AL139424.1-201ENST00000607572 797 ntBASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AL022326.1-202ENST00000641533 845 ntBASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 AC016734.2-201ENST00000624325 1377 ntBASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KCNIP3Q9Y2W7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
KCNIP3Q9Y2W7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 HCG4-201ENST00000418983 998 ntBASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 PMS2P1-201ENST00000431037 1228 ntBASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 DRAXINP1-201ENST00000437611 948 ntBASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 AL589182.2-201ENST00000619332 1049 ntBASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KCNIP3Q9Y2W7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP3Q9Y2W7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP3Q9Y2W7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP3Q9Y2W7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP3Q9Y2W7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
KCNIP3Q9Y2W7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP3Q9Y2W7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms