Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 MIR4321-201ENST00000592276 80 ntBASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 SSR4P1-203ENST00000599569 2260 ntBASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 WASH6P-202ENST00000359512 1437 ntBASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 AL589702.1-201ENST00000641229 1509 ntBASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 AC073439.1-201ENST00000624121 1774 ntBASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 RNA5SP419-201ENST00000515908 135 ntBASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 AC002347.1-201ENST00000569543 541 ntBASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
THUMPD1Q9NXG2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 TPM4P1-201ENST00000436100 807 ntBASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 KRT126P-201ENST00000549467 1181 ntBASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 AC145285.3-201ENST00000564603 959 ntBASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.16■□□□□ 0.02
THUMPD1Q9NXG2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms