Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 AC093512.1-201ENST00000617969 520 ntBASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ECHDC1Q9NTX5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ECHDC1Q9NTX5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
ECHDC1Q9NTX5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ECHDC1Q9NTX5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ECHDC1Q9NTX5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 AP003680.1-201ENST00000598970 3660 ntBASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 AC027369.6-201ENST00000525520 931 ntBASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC1Q9NTX5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 PRAL-201ENST00000624952 3286 ntBASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC1Q9NTX5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.49■□□□□ 0.71
ECHDC1Q9NTX5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 536.1 ms