Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
MMP28Q9H239 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.3□□□□□ -0.12
MMP28Q9H239 FAAHP1-202ENST00000446499 1238 ntBASIC14.3□□□□□ -0.12
MMP28Q9H239 FDX1P1-201ENST00000449115 551 ntBASIC14.3□□□□□ -0.12
MMP28Q9H239 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.3□□□□□ -0.12
MMP28Q9H239 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.3□□□□□ -0.12
MMP28Q9H239 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.3□□□□□ -0.12
MMP28Q9H239 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.3□□□□□ -0.12
MMP28Q9H239 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.3□□□□□ -0.12
MMP28Q9H239 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.3□□□□□ -0.12
MMP28Q9H239 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.3□□□□□ -0.12
MMP28Q9H239 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
MMP28Q9H239 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.3□□□□□ -0.12
MMP28Q9H239 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MMP28Q9H239 AL049757.1-201ENST00000616842 1596 ntBASIC14.3□□□□□ -0.12
MMP28Q9H239 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
MMP28Q9H239 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.3□□□□□ -0.12
MMP28Q9H239 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
MMP28Q9H239 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
MMP28Q9H239 KRT16P4-201ENST00000453883 522 ntBASIC14.29□□□□□ -0.12
MMP28Q9H239 FOSL1P1-201ENST00000511041 816 ntBASIC14.29□□□□□ -0.12
MMP28Q9H239 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.29□□□□□ -0.12
MMP28Q9H239 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 KRT8P10-201ENST00000450021 1447 ntBASIC14.29□□□□□ -0.12
MMP28Q9H239 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 AL135999.2-201ENST00000622438 1686 ntBASIC14.29□□□□□ -0.12
MMP28Q9H239 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MMP28Q9H239 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
MMP28Q9H239 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.29□□□□□ -0.12
MMP28Q9H239 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MMP28Q9H239 AC091951.1-201ENST00000512854 2465 ntBASIC14.29□□□□□ -0.12
MMP28Q9H239 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.28□□□□□ -0.12
MMP28Q9H239 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MMP28Q9H239 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP28Q9H239 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP28Q9H239 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MMP28Q9H239 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP28Q9H239 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MMP28Q9H239 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MMP28Q9H239 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms