Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC079781.3-201ENST00000449110 356 ntBASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC093909.1-201ENST00000504731 1122 ntBASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AL049840.3-201ENST00000602669 611 ntBASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC006486.2-201ENST00000624246 2199 ntBASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.41□□□□□ -0.42
SHANK2-AS3Q9BTD1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AL109954.1-202ENST00000564051 2148 ntBASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC004870.1-201ENST00000315132 882 ntBASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 FAAHP1-202ENST00000446499 1238 ntBASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 PRYP6-201ENST00000514804 343 ntBASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AL691432.3-201ENST00000621860 400 ntBASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC116407.3-201ENST00000623905 1129 ntBASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SHANK2-AS3Q9BTD1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms