Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 AC079781.3-201ENST00000449110 356 ntBASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 AL109954.1-202ENST00000564051 2148 ntBASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 MIR7706-201ENST00000613747 67 ntBASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HDHD3Q9BSH5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AC006058.4-201ENST00000624016 1670 ntBASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AC098831.1-202ENST00000438821 336 ntBASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 VN2R19P-201ENST00000442399 1052 ntBASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 KRT18P56-201ENST00000507275 550 ntBASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AC010507.1-201ENST00000633895 436 ntBASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 TMBIM7P-203ENST00000641617 1718 ntBASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 AC087481.3-201ENST00000602886 1894 ntBASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HDHD3Q9BSH5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HDHD3Q9BSH5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms