Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.3□□□□□ -0.12
VRK1Q99986 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 FRMD8P1-201ENST00000440433 1524 ntBASIC14.3□□□□□ -0.12
VRK1Q99986 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
VRK1Q99986 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.3□□□□□ -0.12
VRK1Q99986 AC131009.4-201ENST00000624048 1740 ntBASIC14.29□□□□□ -0.12
VRK1Q99986 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK1Q99986 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK1Q99986 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.29□□□□□ -0.12
VRK1Q99986 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK1Q99986 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK1Q99986 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK1Q99986 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 SLC25A1P3-201ENST00000395415 828 ntBASIC14.29□□□□□ -0.12
VRK1Q99986 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.29□□□□□ -0.12
VRK1Q99986 AC023141.5-201ENST00000458585 616 ntBASIC14.29□□□□□ -0.12
VRK1Q99986 KRT8P48-201ENST00000515599 1220 ntBASIC14.29□□□□□ -0.12
VRK1Q99986 IGHV3-62-201ENST00000520057 340 ntBASIC14.29□□□□□ -0.12
VRK1Q99986 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 AC025678.2-201ENST00000562061 970 ntBASIC14.29□□□□□ -0.12
VRK1Q99986 AL135744.1-201ENST00000565098 629 ntBASIC14.29□□□□□ -0.12
VRK1Q99986 AL009183.1-201ENST00000603760 355 ntBASIC14.29□□□□□ -0.12
VRK1Q99986 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
VRK1Q99986 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VRK1Q99986 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.29□□□□□ -0.12
VRK1Q99986 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VRK1Q99986 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.28□□□□□ -0.12
VRK1Q99986 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.28□□□□□ -0.12
VRK1Q99986 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.28□□□□□ -0.12
VRK1Q99986 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
VRK1Q99986 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VRK1Q99986 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.28□□□□□ -0.12
VRK1Q99986 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.28□□□□□ -0.12
VRK1Q99986 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.28□□□□□ -0.12
VRK1Q99986 AC079140.1-201ENST00000508039 487 ntBASIC14.28□□□□□ -0.12
VRK1Q99986 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.28□□□□□ -0.12
VRK1Q99986 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.28□□□□□ -0.12
VRK1Q99986 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 RFPL4AP1-201ENST00000530883 850 ntBASIC14.28□□□□□ -0.12
VRK1Q99986 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.28□□□□□ -0.12
VRK1Q99986 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 KRT8P49-201ENST00000604166 1432 ntBASIC14.28□□□□□ -0.12
VRK1Q99986 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VRK1Q99986 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VRK1Q99986 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.28□□□□□ -0.12
VRK1Q99986 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.28□□□□□ -0.12
VRK1Q99986 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms