Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDNQ99608 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NDNQ99608 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NDNQ99608 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NDNQ99608 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 AP005117.1-202ENST00000581724 1908 ntBASIC16.2■□□□□ 0.18
NDNQ99608 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.2■□□□□ 0.18
NDNQ99608 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 RNA5SP416-201ENST00000516838 111 ntBASIC16.2■□□□□ 0.18
NDNQ99608 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.2■□□□□ 0.18
NDNQ99608 AC106730.1-201ENST00000566722 1090 ntBASIC16.2■□□□□ 0.18
NDNQ99608 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.2■□□□□ 0.18
NDNQ99608 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.2■□□□□ 0.18
NDNQ99608 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.2■□□□□ 0.18
NDNQ99608 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.2■□□□□ 0.18
NDNQ99608 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.2■□□□□ 0.18
NDNQ99608 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.2■□□□□ 0.18
NDNQ99608 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.2■□□□□ 0.18
NDNQ99608 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
NDNQ99608 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
NDNQ99608 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDNQ99608 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.19■□□□□ 0.18
NDNQ99608 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
NDNQ99608 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 TNRC18P2-201ENST00000417666 2714 ntBASIC16.19■□□□□ 0.18
NDNQ99608 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NDNQ99608 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NDNQ99608 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NDNQ99608 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 KRT18P3-201ENST00000451602 1288 ntBASIC16.19■□□□□ 0.18
NDNQ99608 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.19■□□□□ 0.18
NDNQ99608 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.19■□□□□ 0.18
NDNQ99608 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 AP002472.1-201ENST00000577490 586 ntBASIC16.19■□□□□ 0.18
NDNQ99608 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.19■□□□□ 0.18
NDNQ99608 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.19■□□□□ 0.18
NDNQ99608 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.19■□□□□ 0.18
NDNQ99608 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 WASH6P-202ENST00000359512 1437 ntBASIC16.19■□□□□ 0.18
NDNQ99608 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.19■□□□□ 0.18
NDNQ99608 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDNQ99608 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NDNQ99608 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NDNQ99608 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDNQ99608 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms