Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 AL353705.2-201ENST00000428243 662 ntBASIC15.67■□□□□ 0.1
PKP4Q99569 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.67■□□□□ 0.1
PKP4Q99569 AL139010.1-201ENST00000454878 894 ntBASIC15.67■□□□□ 0.1
PKP4Q99569 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.67■□□□□ 0.1
PKP4Q99569 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 MIR4453-201ENST00000584019 89 ntBASIC15.67■□□□□ 0.1
PKP4Q99569 MIR6080-201ENST00000617359 66 ntBASIC15.67■□□□□ 0.1
PKP4Q99569 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.67■□□□□ 0.1
PKP4Q99569 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.67■□□□□ 0.1
PKP4Q99569 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 AC022188.1-201ENST00000620960 1664 ntBASIC15.67■□□□□ 0.1
PKP4Q99569 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PKP4Q99569 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.66■□□□□ 0.1
PKP4Q99569 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PKP4Q99569 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.66■□□□□ 0.1
PKP4Q99569 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.66■□□□□ 0.1
PKP4Q99569 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.66■□□□□ 0.1
PKP4Q99569 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.66■□□□□ 0.1
PKP4Q99569 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.66■□□□□ 0.1
PKP4Q99569 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.66■□□□□ 0.1
PKP4Q99569 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.66■□□□□ 0.1
PKP4Q99569 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.66■□□□□ 0.1
PKP4Q99569 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.66■□□□□ 0.1
PKP4Q99569 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.66■□□□□ 0.1
PKP4Q99569 AL512356.2-201ENST00000546955 174 ntBASIC15.66■□□□□ 0.1
PKP4Q99569 BANF1P1-201ENST00000553684 263 ntBASIC15.66■□□□□ 0.1
PKP4Q99569 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.66■□□□□ 0.1
PKP4Q99569 AC243562.2-201ENST00000561247 970 ntBASIC15.66■□□□□ 0.1
PKP4Q99569 AC105021.1-202ENST00000570572 669 ntBASIC15.66■□□□□ 0.1
PKP4Q99569 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.66■□□□□ 0.1
PKP4Q99569 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.66■□□□□ 0.1
PKP4Q99569 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.66■□□□□ 0.1
PKP4Q99569 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.66■□□□□ 0.1
PKP4Q99569 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PKP4Q99569 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.65■□□□□ 0.1
PKP4Q99569 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.65■□□□□ 0.1
PKP4Q99569 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PKP4Q99569 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.65■□□□□ 0.1
PKP4Q99569 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.65■□□□□ 0.1
PKP4Q99569 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.65■□□□□ 0.1
PKP4Q99569 AC069262.1-201ENST00000539058 672 ntBASIC15.65■□□□□ 0.1
PKP4Q99569 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.65■□□□□ 0.1
PKP4Q99569 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.65■□□□□ 0.1
PKP4Q99569 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.65■□□□□ 0.1
PKP4Q99569 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.65■□□□□ 0.1
PKP4Q99569 AC026979.3-201ENST00000607315 403 ntBASIC15.65■□□□□ 0.1
PKP4Q99569 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.65■□□□□ 0.1
PKP4Q99569 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PKP4Q99569 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.65■□□□□ 0.1
PKP4Q99569 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.65■□□□□ 0.1
PKP4Q99569 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PKP4Q99569 BNIP3P1-202ENST00000550043 1585 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms