Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC244452.3-201ENST00000636814 210 ntBASIC16.28■□□□□ 0.2
PHOX2BQ99453 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 CROCCP1-201ENST00000426910 5675 ntBASIC16.28■□□□□ 0.2
PHOX2BQ99453 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.28■□□□□ 0.2
PHOX2BQ99453 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHOX2BQ99453 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 RN7SL769P-201ENST00000469386 295 ntBASIC16.27■□□□□ 0.2
PHOX2BQ99453 IMP3P2-201ENST00000489760 475 ntBASIC16.27■□□□□ 0.2
PHOX2BQ99453 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.27■□□□□ 0.2
PHOX2BQ99453 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 CU634019.7-201ENST00000624153 1185 ntBASIC16.27■□□□□ 0.2
PHOX2BQ99453 FP236241.2-201ENST00000624906 1185 ntBASIC16.27■□□□□ 0.2
PHOX2BQ99453 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHOX2BQ99453 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.27■□□□□ 0.2
PHOX2BQ99453 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHOX2BQ99453 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHOX2BQ99453 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHOX2BQ99453 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.27■□□□□ 0.19
PHOX2BQ99453 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHOX2BQ99453 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHOX2BQ99453 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PHOX2BQ99453 KRT8P22-201ENST00000562317 1415 ntBASIC16.27■□□□□ 0.19
PHOX2BQ99453 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PHOX2BQ99453 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PHOX2BQ99453 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AL513477.1-201ENST00000602865 2407 ntBASIC16.26■□□□□ 0.19
PHOX2BQ99453 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AL691447.1-201ENST00000419456 387 ntBASIC16.26■□□□□ 0.19
PHOX2BQ99453 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 MIR4750-201ENST00000584564 56 ntBASIC16.26■□□□□ 0.19
PHOX2BQ99453 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 HLA-C-210ENST00000640219 976 ntBASIC16.26■□□□□ 0.19
PHOX2BQ99453 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PHOX2BQ99453 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PHOX2BQ99453 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms