Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
IFT140Q96RY7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
IFT140Q96RY7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
IFT140Q96RY7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 AL136309.1-201ENST00000403917 691 ntBASIC25.91■■□□□ 1.74
IFT140Q96RY7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 AC242376.1-201ENST00000559033 726 ntBASIC25.91■■□□□ 1.74
IFT140Q96RY7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 AC025181.2-201ENST00000606994 802 ntBASIC25.91■■□□□ 1.74
IFT140Q96RY7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC25.91■■□□□ 1.74
IFT140Q96RY7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT140Q96RY7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 AL139094.1-201ENST00000405549 1188 ntBASIC25.9■■□□□ 1.74
IFT140Q96RY7 ISCA2P1-201ENST00000425548 448 ntBASIC25.9■■□□□ 1.74
IFT140Q96RY7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 EID1-202ENST00000560490 584 ntTSL 3 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 MIR4754-201ENST00000582477 89 ntBASIC25.9■■□□□ 1.74
IFT140Q96RY7 AC103691.2-201ENST00000618824 433 ntBASIC25.9■■□□□ 1.74
IFT140Q96RY7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
IFT140Q96RY7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
IFT140Q96RY7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
IFT140Q96RY7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
IFT140Q96RY7 KRT8P14-201ENST00000414254 1442 ntBASIC25.89■■□□□ 1.74
IFT140Q96RY7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC25.89■■□□□ 1.74
IFT140Q96RY7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC25.89■■□□□ 1.74
IFT140Q96RY7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 EIF3FP3-201ENST00000434851 1086 ntBASIC25.89■■□□□ 1.73
IFT140Q96RY7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
IFT140Q96RY7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
IFT140Q96RY7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
IFT140Q96RY7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
IFT140Q96RY7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
IFT140Q96RY7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
IFT140Q96RY7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT140Q96RY7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT140Q96RY7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
IFT140Q96RY7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC25.88■■□□□ 1.73
IFT140Q96RY7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
IFT140Q96RY7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
IFT140Q96RY7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT140Q96RY7 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
IFT140Q96RY7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
IFT140Q96RY7 AC125604.1-201ENST00000496255 707 ntBASIC25.88■■□□□ 1.73
IFT140Q96RY7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT140Q96RY7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT140Q96RY7 AC068587.8-201ENST00000641239 219 ntBASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms