Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC104596.2-201ENST00000512793 793 ntBASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AL139011.1-202ENST00000642063 584 ntBASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 NUP210P1-202ENST00000504322 710 ntBASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AC025279.2-201ENST00000569730 653 ntBASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 C2orf27AP3-201ENST00000434123 579 ntBASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 RPSAP36-202ENST00000494591 1261 ntBASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 AL354718.3-201ENST00000616414 581 ntBASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 CR382287.1-201ENST00000623954 586 ntBASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 AC044849.1-201ENST00000519737 1188 ntBASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.46□□□□□ -0.25
CSMD1Q96PZ7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSMD1Q96PZ7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD1Q96PZ7 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms