Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 AL022342.1-201ENST00000400363 863 ntBASIC14.13□□□□□ -0.15
SPTSSAQ969W0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 MCCD1P2-201ENST00000423228 335 ntBASIC14.13□□□□□ -0.15
SPTSSAQ969W0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 AC027307.2-201ENST00000591252 911 ntBASIC14.13□□□□□ -0.15
SPTSSAQ969W0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.13□□□□□ -0.15
SPTSSAQ969W0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 YBX2P1-201ENST00000394192 760 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 IGHV3-62-201ENST00000520057 340 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AL138918.1-201ENST00000568306 659 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 MTDHP5-201ENST00000598980 586 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AC026120.1-201ENST00000611536 926 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 C20orf181-201ENST00000623918 480 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AC092902.6-201ENST00000641783 218 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AL161772.1-201ENST00000610494 4412 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 AC105917.1-201ENST00000506637 2539 ntBASIC14.12□□□□□ -0.15
SPTSSAQ969W0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SPTSSAQ969W0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 AC011477.6-201ENST00000604980 1927 ntBASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 AC046158.3-201ENST00000624947 2558 ntBASIC14.11□□□□□ -0.15
SPTSSAQ969W0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 AC004832.2-201ENST00000426397 482 ntBASIC14.11□□□□□ -0.15
SPTSSAQ969W0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTSSAQ969W0 POLD2P1-201ENST00000511220 997 ntBASIC14.11□□□□□ -0.15
SPTSSAQ969W0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms