Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 RHOQP3-201ENST00000437982 621 ntBASIC14.49□□□□□ -0.09
PTP4A1Q93096 HCG4B-203ENST00000450128 991 ntBASIC14.49□□□□□ -0.09
PTP4A1Q93096 KRT18P34-201ENST00000488218 1270 ntBASIC14.49□□□□□ -0.09
PTP4A1Q93096 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 AC034105.1-201ENST00000563488 319 ntBASIC14.49□□□□□ -0.09
PTP4A1Q93096 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTP4A1Q93096 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.49□□□□□ -0.09
PTP4A1Q93096 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 AC073439.1-201ENST00000624121 1774 ntBASIC14.48□□□□□ -0.09
PTP4A1Q93096 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 AC096734.2-201ENST00000562054 433 ntBASIC14.48□□□□□ -0.09
PTP4A1Q93096 AC106730.1-201ENST00000566722 1090 ntBASIC14.48□□□□□ -0.09
PTP4A1Q93096 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 AL078644.1-201ENST00000609881 752 ntBASIC14.48□□□□□ -0.09
PTP4A1Q93096 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.48□□□□□ -0.09
PTP4A1Q93096 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 AC105250.1-201ENST00000509378 2057 ntBASIC14.48□□□□□ -0.09
PTP4A1Q93096 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.48□□□□□ -0.09
PTP4A1Q93096 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTP4A1Q93096 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.47□□□□□ -0.09
PTP4A1Q93096 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.47□□□□□ -0.09
PTP4A1Q93096 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PTP4A1Q93096 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.47□□□□□ -0.09
PTP4A1Q93096 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 AC087481.3-201ENST00000602886 1894 ntBASIC14.47□□□□□ -0.09
PTP4A1Q93096 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTP4A1Q93096 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PTP4A1Q93096 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms