Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 SPDYE7P-202ENST00000420373 878 ntBASIC17.25■□□□□ 0.35
SEMA4DQ92854 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.25■□□□□ 0.35
SEMA4DQ92854 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SEMA4DQ92854 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.25■□□□□ 0.35
SEMA4DQ92854 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 KRT18P28-201ENST00000453838 1332 ntBASIC17.24■□□□□ 0.35
SEMA4DQ92854 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 AZGP1P1-201ENST00000411909 902 ntBASIC17.24■□□□□ 0.35
SEMA4DQ92854 HIST3H2BA-201ENST00000436555 524 ntBASIC17.24■□□□□ 0.35
SEMA4DQ92854 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 AC004449.1-201ENST00000564240 433 ntBASIC17.24■□□□□ 0.35
SEMA4DQ92854 MIR4313-201ENST00000580760 101 ntBASIC17.24■□□□□ 0.35
SEMA4DQ92854 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 CICP13-201ENST00000422015 2789 ntBASIC17.24■□□□□ 0.35
SEMA4DQ92854 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.24■□□□□ 0.35
SEMA4DQ92854 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SEMA4DQ92854 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 SPDYE17-201ENST00000412399 783 ntBASIC17.23■□□□□ 0.35
SEMA4DQ92854 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SEMA4DQ92854 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.23■□□□□ 0.35
SEMA4DQ92854 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms