Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.07■□□□□ 0.32
HERVK_113Q902F9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.07■□□□□ 0.32
HERVK_113Q902F9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 HOMER2P2-201ENST00000451621 847 ntBASIC17.07■□□□□ 0.32
HERVK_113Q902F9 RPSAP36-202ENST00000494591 1261 ntBASIC17.07■□□□□ 0.32
HERVK_113Q902F9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 AC132938.4-201ENST00000623835 848 ntBASIC17.07■□□□□ 0.32
HERVK_113Q902F9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERVK_113Q902F9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 AC136604.1-201ENST00000418535 575 ntBASIC17.06■□□□□ 0.32
HERVK_113Q902F9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 PHKG1P2-201ENST00000457537 863 ntBASIC17.06■□□□□ 0.32
HERVK_113Q902F9 HIST2H2BC-201ENST00000498492 580 ntBASIC17.06■□□□□ 0.32
HERVK_113Q902F9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 MIR4722-201ENST00000578292 60 ntBASIC17.06■□□□□ 0.32
HERVK_113Q902F9 MIR3619-201ENST00000579667 83 ntBASIC17.06■□□□□ 0.32
HERVK_113Q902F9 EEF1DP1-201ENST00000585891 896 ntBASIC17.06■□□□□ 0.32
HERVK_113Q902F9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 AC015818.8-201ENST00000587907 1519 ntBASIC17.06■□□□□ 0.32
HERVK_113Q902F9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERVK_113Q902F9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 HINT2P1-201ENST00000419438 481 ntBASIC17.05■□□□□ 0.32
HERVK_113Q902F9 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 POU5F1P6-201ENST00000466990 990 ntBASIC17.05■□□□□ 0.32
HERVK_113Q902F9 KRT18P43-201ENST00000469825 1281 ntBASIC17.05■□□□□ 0.32
HERVK_113Q902F9 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 AP005019.2-201ENST00000615104 511 ntBASIC17.05■□□□□ 0.32
HERVK_113Q902F9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 AL121723.1-201ENST00000445194 1519 ntBASIC17.05■□□□□ 0.32
HERVK_113Q902F9 AL592424.1-201ENST00000563624 1536 ntBASIC17.05■□□□□ 0.32
HERVK_113Q902F9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERVK_113Q902F9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERVK_113Q902F9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERVK_113Q902F9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.04■□□□□ 0.32
HERVK_113Q902F9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.04■□□□□ 0.32
HERVK_113Q902F9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HERVK_113Q902F9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HERVK_113Q902F9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HERVK_113Q902F9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms